annogen : Annogen is a tool which helps you work with JSR175 annotations ( http://annogen.codehaus.org/ )
bcprov : Java cryptography APIs ( http://www.bouncycastle.org/java.html )
cglib : cglib is a powerful, high performance and quality Code Generation Library. ( http://cglib.sourceforge.net )
commons-digester : Reads XML configuration files to provide initialization of various Java objects within the system. ( http://commons.apache.org/digester/ )
fop : Formatting Objects Processor is a print formatter driven by XSL ( http://xmlgraphics.apache.org/fop/ )
freemarker : FreeMarker is a template engine; a generic tool to generate text output based on templates. ( http://freemarker.sourceforge.net/ )
glazedlists : A toolkit for list transformations ( http://publicobject.com/glazedlists/ )
groovy : Groovy is a high-level dynamic language for the JVM ( http://groovy.codehaus.org/ )
guice : Guice is a lightweight dependency injection framework for Java 5 and above. ( http://code.google.com/p/google-guice/ )
jcommander : Command line parsing framework for Java ( https://github.com/cbeust/jcommander )
jgoodies-common : JGoodies Common Library ( http://www.jgoodies.com/ )
jgoodies-forms : JGoodies Forms Library ( http://www.jgoodies.com/ )
jgoodies-looks : JGoodies Looks Library ( http://www.jgoodies.com/ )
nekohtml : A simple HTML scanner and tag balancer using standard XML interfaces. ( http://nekohtml.sourceforge.net/ )
owasp-antisamy : OWASP AntiSamy allows users to supply their own HTML and CSS without exposure to XSS vulnerabilities ( https://code.google.com/p/owaspantisamy/ )
owasp-esapi : The OWASP Enterprise Security API is a web application security control library ( https://code.google.com/p/owasp-esapi-java )
pcfi : PDF Core Font Information ( https://github.com/jukka/pcfi )
pdfbox : Java library and utilities for working with PDF documents ( http://pdfbox.apache.org/ )
piccolo : A small, extremely fast XML parser for Java ( http://piccolo.sourceforge.net/ )
proguard : Free Java class file shrinker, optimizer, and obfuscator. ( http://proguard.sourceforge.net/ )
testng : TestNG is a testing framework inspired from JUnit and NUnit ( http://testng.org/ )
xml-security : The XML Security project is aimed at providing implementation o ( http://santuario.apache.org/ )
xml-xmlbeans : An XML-Java binding tool ( http://xmlbeans.apache.org/ )
xmlgraphics-commons : A library of several reusable components used by Apache Batik and Apache FOP. ( http://xmlgraphics.apache.org/commons/index.html )
Add an ebuild in portage :
The ebuild is now in the portage tree.
You can also use layman : emerge layman then layman -a dmol
For Paludis use this rsync : rsync://gentoo.zugaina.org/dmol-portage
If you have a problem : ycarus(-at-)zugaina.org