Ycarus Gentoo ebuild

science

These ebuilds come from .

If you have some problems, go to the official site first.

dev-python

Forthon : Python interface generator for Fortran based codes ( http://hifweb.lbl.gov/Forthon )

GOGrapher : A Gene Ontology Programming Library ( https://projects.dbbe.musc.edu/trac/GOGrapher )

PeakUtils : Peak detection utilities for 1D data ( https://bitbucket.org/lucashnegri/peakutils )

PyVISA : Python VISA bindings for GPIB, RS232, and USB instruments ( https://github.com/hgrecco/pyvisa-py )

PyVISA-py : Python VISA bindings for GPIB, RS232, and USB instruments ( https://github.com/hgrecco/pyvisa-py )

RecSQL : Simple SQL analysis of python records ( http://orbeckst.github.com/RecSQL/ )

absl-py : Abseil Python Common Libraries ( https://github.com/abseil/abseil-py )

arrayfire-python : Python bindings for ArrayFire ( http://www.arrayfire.com )

astropy : Core functionality for performing astrophysics with Python ( http://astropy.org/ )

astropy-helpers : Helpers for Astropy and Affiliated packages ( https://github.com/astropy/astropy-helpers )

astropysics : General purpose python library for professional astronomers/astrophysicists ( http://packages.python.org/Astropysics/ )

astroquery : A collection of packages to access online astronomical resources ( https://github.com/astropy/astroquery )

bcbio-gff : Read and write Generic Feature Format (GFF) with Biopython ( https://pypi.python.org/pypi/bcbio-gff )

brewer2mpl : Connect colorbrewer2.org color maps to Python and matplotlib ( https://github.com/jiffyclub/brewer2mpl )

ccdproc : Astropy affiliated package for reducing optical/IR CCD data ( https://github.com/astropy/ccdproc )

coards : Converts COARDS between time specification and a Python datetime object ( http://dealmeida.net/ )

coords : Managing astronomical coordinate systems ( https://trac6.assembla.com/astrolib/wiki/ )

cosmocalc : Simple cosmology python module ( http://cxc.harvard.edu/contrib/cosmocalc/ http://pypi.python.org/pypi/cosmocalc/ )

dijitso : Python module for distributed just-in-time shared library building ( https://bitbucket.org/fenics-project/dijitso/ )

dimensionful : A simple library for making your data dimensionful ( https://github.com/caseywstark/dimensionful )

ffc : Compiler for multilinear forms by generating C or C++ code ( https://bitbucket.org/fenics-project/ffc/ )

ffnet : Feed-forward neural network for python ( http://ffnet.sourceforge.net/ )

ffnetui : GUI for ffnet - feed forward neural network for python ( http://ffnet.sourceforge.net )

fiat : FInite element Automatic Tabulator ( https://bitbucket.org/fenics-project/fiat )

gammapy : A Python package for gamma-ray astronomy ( https://github.com/gammapy/gammapy )

grabbit : Get grabby with file trees ( https://github.com/grabbles/grabbit )

hdf5storage : Read/write Python types to/from HDF5 files, including MATLAB v7.3 MAT files ( https://github.com/frejanordsiek/hdf5storage )

imageutils : Image processing utilities for Astropy ( https://github.com/astropy/imageutils )

inference : Collection of Python modules for statistical inference ( http://inference.astro.cornell.edu/ )

instant : Instant inlining of C and C++ code in Python ( https://bitbucket.org/fenics-project/instant/ )

ipykernel : IPython Kernel for Jupyter ( https://github.com/ipython/ipykernel )

ipyparallel : Interactive Parallel Computing with IPython ( http://ipython.org/ )

ipython_genutils : Vestigial utilities from IPython ( https://github.com/ipython/ipython_genutils )

ipywidgets : IPython HTML widgets for Jupyter ( http://ipython.org/ )

jupyter_client : Jupyter protocol implementation and client libraries ( http://jupyter.org )

jupyter_console : A terminal-based console frontend for Jupyter kernels ( http://jupyter.org )

jupyter_core : Core common functionality of Jupyter projects ( http://jupyter.org )

lasagne : Lightweight library to build and train neural networks in Theano ( https://github.com/Lasagne/Lasagne )

matlab_wrapper : MATLAB wrapper for Python ( https://github.com/mrkrd/matlab_wrapper )

matplotlib-venn : Routines for plotting area-weighted two- and three-circle venn diagrams ( http://pysurfer.github.com )

matplotlib2tikz : Convert matplotlib figures into TikZ/PGFPlots ( https://github.com/nschloe/matplotlib2tikz )

matrix2latex : A tool to create LaTeX tables from python lists and arrays ( https://github.com/TheChymera/matrix2latex )

meshpy : Quality triangular and tetrahedral mesh generation for Python ( http://mathema.tician.de/software/meshpy http://pypi.python.org/pypi/MeshPy )

metakernel : Metakernel for Jupyter ( https://github.com/Calysto/metakernel )

metakernel_bash : A Bash kernel for Jupyter/IPython ( https://github.com/Calysto/metakernel )

metakernel_python : A Python kernel for Jupyter/IPython ( https://github.com/Calysto/metakernel )

nbconvert : Converting Jupyter Notebooks ( http://jupyter.org )

nbdime : Diff and merge of Jupyter Notebooks ( http://jupyter.org )

nbformat : Reference implementation of the Jupyter Notebook format ( http://jupyter.org )

nbviewer : Nbconvert as a webservice (rendering ipynb to static HTML) ( http://jupyter.org )

newrelic : New Relic Python Agent ( http://newrelic.com/docs/python/new-relic-for-python )

ngslib : Work with BED, WIG, BigWIG, 2bit files in python ( https://pypi.python.org/pypi/ngslib )

notebook : Jupyter Interactive Notebook ( http://jupyter.org )

num2words : Modules to convert numbers to words. ( https://github.com/savoirfairelinux/num2words )

omniorbpy : A robust high-performance CORBA ORB for Python ( http://omniorb.sourceforge.net/ )

opal-client : Python Opal Web Service Client ( http://www.nbcr.net/data/docs/opal/documentation.html )

pamela : PAM interface using ctypes ( https://github.com/minrk/pamela )

photutils : Affiliated package for image photometry utilities ( https://github.com/astropy/photutils )

pickleshare : A small 'shelve' like datastore with concurrency support ( https://github.com/pickleshare/pickleshare )

prettyplotlib : Painlessly create beautiful matplotlib plots ( http://blog.olgabotvinnik.com/prettyplotlib/ )

prov : W3C provenance data dodel library ( https://pypi.python.org/pypi/prov )

psubprocess : Execute tasks in parallel ( http://bioinf.comav.upv.es/psubprocess )

ptyprocess : Run a subprocess in a pseudo terminal ( https://github.com/pexpect/ptyprocess )

py2bit : Python library for accessing 2bit files ( https://github.com/dpryan79/py2bit )

pyBigWig : Python extension written in C for quick access to and creation of bigWig files ( https://github.com/dpryan79/pyBigWig )

pydotplus : Improved version of the old pydot project ( http://pydotplus.readthedocs.org/ )

pyfftw : FFTW wrapper for python ( http://hgomersall.github.io/pyFFTW/ )

pyhdf : Python interface to NCSA HDF4 library ( http://pysclint.sourceforge.net/pycdf/ http://pypi.python.org/pypi/pyhdf )

pylibconfig2 : Pure python library for libconfig syntax ( https://github.com/heinzK1X/pylibconfig2 )

pynomo : PyNomo is a program to create nomographs (nomograms) using Python interpreter ( http://pynomo.org )

pynrrd : Simple pure-python module for reading and writing nrrd files ( https://github.com/mhe/pynrrd )

pysolar : Collection of Python libraries for simulating the irradiation by the sun ( http://pysolar.org/ )

python-ivi : Python-based interpretation of the Interchangeable Virtual Instrument standard ( https://github.com/python-ivi/python-ivi )

python-vxi11 : Provides a pure Python VXI-11 driver for controlling instruments over Ethernet ( https://github.com/python-ivi/python-vxi11 )

pythoncgns : Python language bindings for the CGNS library ( http://pypi.python.org/pypi/CGNS/ )

pyvcf : Work with VCF files in python ( https://pypi.python.org/pypi/PyVCF )

pywcsgrid2 : Custom Matplotlib Axes class for displaying astronomical fits images ( http://leejjoon.github.io/pywcsgrid2/ )

qtconsole : Qt-based console for Jupyter with support for rich media output ( http://jupyter.org )

shove : Object storage frontend to DBM/fs/mem/sqlite backends ( https://github.com/lcrees/shov )

snakemake : Make-like task language ( https://bitbucket.org/johanneskoester/snakemake/wiki/Home )

specutils : Affiliated package for 1D spectral operations ( https://github.com/astropy/specutils )

symengine : Python wrappers to the symengine C++ library ( https://github.com/sympy/symengine.py )

testpath : Test utilities for code working with files and commands ( http://jupyter.org )

traitlets : A configuration system for Python applications ( https://github.com/ipython/traitlets )

trimesh : Python library for loading and using triangular meshes. ( https://trimsh.org/ )

ufl : Unified Form Language for declaration of for FE discretizations ( https://bitbucket.org/fenics-project/ufl/ )

viper : Minimalistic scientific plotter and run-time visualization module ( https://launchpad.net/fenics-viper )

widgetsnbextension : IPython HTML widgets for Jupyter ( http://ipython.org/ )

xopen : Open compressed files transparently ( https://pypi.python.org/pypi/xopen )

Add an ebuild in portage :

The ebuild is now in the portage tree.

You can also use layman : emerge layman then layman -a science

For Paludis use this rsync : rsync://gentoo.zugaina.org/science-portage

If you have a problem : ycarus(-at-)zugaina.org