HDF5Plugin-Zstandard : ZSTD plugin for hdf5 ( https://github.com/aparamon/HDF5Plugin-Zstandard )
amber99sb_phipsi : AMBER99SB PHI PSI table (Lindorff-Larsen et al., Proteins 78, 1950-58, 2010) ( https://research.cbc.osu.edu/bruschweiler.1/protein-force-field/ )
amber99sbnmr : AMBER99SBnmr1 force field (Lindorff-Larsen et al., Proteins 78, 1950-58, 2010) ( https://research.cbc.osu.edu/bruschweiler.1/protein-force-field/ )
amber99sbnmr-ildn : AMBER99SBnmr1-ILDN FF (Lindorff-Larsen et al., Proteins 78, 1950-58, 2010) ( https://research.cbc.osu.edu/bruschweiler.1/protein-force-field/ )
aocl-libm : Optimized libm replacement from AMD for x86_64 architectures ( https://developer.amd.com/amd-aocl/amd-math-library-libm/" einfo "\t ${HOMEPAGE} )
aocl-sparse : AMD library for optimized sparse BLAS operations ( https://developer.amd.com/amd-aocl/ )
arrayfire : general purpose GPU library ( https://arrayfire.com/ )
asl : Hardware accelerated multiphysics simulation platform ( http://asl.org.il/ )
bids-validator : Validator for the Brain Imaging Data Structure ( https://github.com/bids-standard/bids-validator )
ciftilib : C++ Library for reading and writing CIFTI-2 and CIFTI-1 files ( https://github.com/Washington-University/CiftiLib )
clfft : Library containing FFT functions written in OpenCL ( https://github.com/clMathLibraries/clFFT )
clrng : A library for uniform random number generation in OpenCL ( https://github.com/clMathLibraries/clRNG )
cs-rosetta-db : System for chemical shifts based protein structure prediction using ROSETTA ( https://spin.niddk.nih.gov/bax/software/CSROSETTA/ )
daal4py : Python API to the oneAPI Data Analytics Library ( https://github.com/intel/scikit-learn-intelex )
ensmallen : header only C++ library for numerical optimization ( https://ensmallen.org )
etsf_io : A library of F90 routines to read/write the ETSF file format ( https://github.com/ElectronicStructureLibrary/libetsf_io )
fdlibm : C math library supporting IEEE 754 floating-point arithmetic ( https://www.netlib.org/fdlibm )
fgsl : A Fortran interface to the GNU Scientific Library ( https://doku.lrz.de/display/PUBLIC/FGSL+-+A+Fortran+interface+to+the+GNU+Scientific+Library/ )
fox : A library designed to allow the easy use of XML from Fortran ( https://homepages.see.leeds.ac.uk/~earawa/FoX// )
gdcm : Cross-platform DICOM implementation ( http://gdcm.sourceforge.net/ )
handyg : Rapid numerical evaluation of generalised polylogarithms ( https://gitlab.com/mule-tools/handyg )
htslib-plugins : iRODs plugins for =htslib-1.4 ( https://github.com/samtools/htslib-plugins )
iRODS : Integrated Rule Oriented Data System, a data management software ( https://irods.org )
itk : NLM Insight Segmentation and Registration Toolkit ( https://itk.org )
labbookdb : Lab Book Database Framework ( https://github.com/TheChymera/LabbookDB )
lib2bit : C library for accessing 2bit files ( https://github.com/dpryan79/lib2bit )
libStatGen : Set of classes for creating statistical genetic programs ( https://github.com/statgen/libStatGen )
libflame-amd : AMD optimized high-performance object-based library for DLA computations ( https://developer.amd.com/amd-aocl/ )
libmatheval : library to parse and evaluate symbolic expressions ( https://www.gnu.org/software/libmatheval/ )
libsufr : LIBrary of Some Useful Fortran Routines ( http://libsufr.sourceforge.net/ )
lwpr : The Locally Weighted Projection Regression Library ( https://web.inf.ed.ac.uk/slmc )
mesquite : Mesh Quality Improvement Toolkit ( https://trilinos.github.io/mesquite.html )
nexus : Data format for neutron and x-ray scattering data ( http://nexusformat.org/ )
nibabel : Access a cacophony of neuro-imaging file formats ( https://nipy.org/nibabel/ )
nipype : Neuroimaging in Python: Pipelines and Interfaces ( https://nipype.readthedocs.io/ )
oneDAL : oneAPI Data Analytics Library ( https://github.com/oneapi-src/oneDAL )
oneMKL : oneAPI Math Kernel Library Interfaces ( https://github.com/oneapi-src/oneMKL )
optpp : C++ library for non-linear optimization ( https://software.sandia.gov/opt++/ )
pfft : Parallel 3d FFT ( https://www-user.tu-chemnitz.de/~potts/workgroup/pippig/software.php.en )
pg2plplot : Assist the transition from PGPlot to PLplot in Fortran programs ( http://pg2plplot.sourceforge.net )
pybids : Python package to access BIDS datasets ( https://github.com/INCF/pybids )
pydicom : A pure python package for parsing DICOM files ( https://pydicom.github.io/pydicom/dev/ )
rdkit : Cheminformatics and machine-learning software written in C++ and Python ( http://www.rdkit.org/ )
scikit-learn-intelx : Seamless way to speed up your Scikit-learn application ( https://github.com/intel/scikit-learn-intelex )
simpleitk : Layer on top of ITK for rapid prototyping, education and interpreted languages. ( https://simpleitk.org/ )
spyking-circus : Fast spike sorting by template matching ( https://github.com/spyking-circus/spyking-circus/ )
starparse : Library for parsing NMR star files (peak-list format) and CIF files ( http://burrow-owl.sourceforge.net/ )
torchvision : Datasets, transforms and models to specific to computer vision ( https://github.com/pytorch/vision )
vegas : Adaptive multidimensional Monte Carlo integration. ( https://github.com/gplepage/vegas )
wannier90 : Calculates maximally localized Wannier functions (MLWFs) ( http://www.wannier.org/ )
zarja : Scientific multi-agent simulation library ( https://sourceforge.net/projects/zarja/ )
Pour rajouter une e-build dans l'arbre de portage :
L'ebuild est alors rajouté dans l'arbre de portage.
Vous pouvez aussi utiliser layman : emerge layman puis layman -a science
Pour Paludis utilisez ce rsync : rsync://gentoo.zugaina.org/science-portage
En cas de problèmes : ycarus(-at-)zugaina.org