These ebuilds come from http://dev.gentoo.org/~dberkholz/overlay/.
If you have some problems, go to the official site first.
biskit : This is a sample skeleton ebuild file ( )
foldx-bin : A force field for energy calculations in proteins ( http://foldx.crg.es/" elog "Download ${A} from ${HOMEPAGE} )
jalview : This is a sample skeleton ebuild file ( http://foo.bar.com/ )
mmult : MAtching Molecular Models Obtained from THeory ( http://ub.cbm.uam.es/software.php" einfo "${HOMEPAGE} )
probalign : Probalign uses partition function posterior probability estimates to compute maximum expected accuracy multiple sequence alignments ( http://www.cs.njit.edu/usman/probalign/ )
sap : Pairwise protein structure alignment via double dynamic programming ( http://mathbio.nimr.mrc.ac.uk/wiki/SAP )
Add an ebuild in portage :
The ebuild is now in the portage tree.
You can also use layman : emerge layman then layman -a zugaina
For Paludis use this rsync : rsync://gentoo.zugaina.org/zugaina-portage
If you have a problem : ycarus(-at-)zugaina.org