MotionCor2 : Correction of electron beam-induced sample motion ( https://emcore.ucsf.edu/ucsf-motioncor2" elog "\t ${HOMEPAGE} )
chimera : Next generation molecular visualization program from RBVI ( https://www.cgl.ucsf.edu/chimera/ )
concoord : Protein conformations around a known structure based on geometric restrictions ( https://www3.mpibpc.mpg.de/groups/de_groot/concoord/concoord.html )
ctffind : CTF estimation (ctffind, ctftilt) ( https://grigoriefflab.umassmed.edu/ )
dl_poly : a general purpose molecular dynamics simulation package ( http://www.ccp5.ac.uk/DL_POLY/ )
drawxtl : Crystal structure drawings from structural data ( http://www.lwfinger.net/drawxtl/ )
erkale : Quantum chemistry program for atoms and molecules ( https://github.com/susilehtola/erkale )
gamess : A powerful quantum chemistry package ( https://www.msg.chem.iastate.edu/GAMESS/GAMESS.html )
jligand : Java interface which allows links descriptions to be created ( http://www.ysbl.york.ac.uk/mxstat/JLigand/ )
mics : Prediction of Protein Structural Motifs from NMR Chemical Shifts ( https://spin.niddk.nih.gov/bax/software/MICS/ )
nmrpipe : Spectral visualisation, analysis and Fourier processing ( https://www.ibbr.umd.edu/nmrpipe )
pales-bin : Prediction of alignment from structure ( http://www3.mpibpc.mpg.de/groups/zweckstetter/_links/software_pales.htm )
panav : Probabilistic approach for validating protein NMR chemical shift assignments ( https://link.springer.com/article/10.1007%2Fs10858-010-9407-y/fulltext.html )
relion : Image-processing software for cryo-electron microscopy ( https://www3.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page )
ssp : Secondary structure propensities ( http://abragam.med.utoronto.ca/software.html )
Add an ebuild in portage :
The ebuild is now in the portage tree.
You can also use layman : emerge layman then layman -a science
For Paludis use this rsync : rsync://gentoo.zugaina.org/science-portage
If you have a problem : ycarus(-at-)zugaina.org